BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026A11SP1|AL428486
(815 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1431 1610 0.0
>3x_Contig1431
Length = 10954
Score = 1610 bits (811), Expect = 0.0
Identities = 813/815 (99%)
Strand = Plus / Minus
Query: 1 gatctttatttaacgaatgaagattccccatgctgcaccaggcaatggggttatacttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2933 gatctttatttaacgaatgaagattccccatgctgcaccaggcaatggggttatacttat 2874
Query: 61 ccaacgttaatagctccgcgcataaagcggataagtgtgttttgtcttgcaaatgccata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2873 ccaacgttaatagctccgcgcataaagcggataagtgtgttttgtcttgcaaatgccata 2814
Query: 121 aaacggttgagaaggtgtccatatcttgaaaccgcgtaggttgtaaagttcttaatttcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2813 aaacggttgagaaggtgtccatatcttgaaaccgcgtaggttgtaaagttcttaatttcg 2754
Query: 181 tgaagtaagatttagccatttcataattaactaattcaaaatgtagcttacccaatgtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2753 tgaagtaagatttagccatttcataattaactaattcaaaatgtagcttacccaatgtgg 2694
Query: 241 ataaacaccaaggcatagacaccgctatctgtagtggaatgcgattttgcatcatgcgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2693 ataaacaccaaggcatagacaccgctatctgtagtggaatgcgattttgcatcatgcgga 2634
Query: 301 tggctttgaatgaatcataccttgacttgcaatattctatatggatgaagttggagaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2633 tggctttgaatgaatcataccttgacttgcaatattctatatggatgaagttggagaaaa 2574
Query: 361 gttcatccaaatttgagtcaaaagtgctaatgtttggcatctgatatgagttgttggtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2573 gttcatccaaatttgagtcaaaagtgctaatgtttggcatctgatatgagttgttggtca 2514
Query: 421 taatttttttatccatgggagaccttaacaacttggtttgggaatctgttcctgacagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2513 taatttttttatccatgggagaccttaacaacttggtttgggaatctgttcctgacagtt 2454
Query: 481 tcgatggtgttgtagttccgagatgtttagtatcgatagaagatgtgtttgtagtggtta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2453 tcgatggtgttgtagttccgagatgtttagtatcgatagaagatgtgtttgtagtggtta 2394
Query: 541 catttgcacttgaagttgcagtagttggtgttgtagtaaaccttgtgtgttttttaaaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2393 catttgcacttgaagttgcagtagttggtgttgtagtaaaccttgtgtgttttttaaaga 2334
Query: 601 ratgaggagaaatggatacaccaacgttagaagccgataataaggatgtagtttgggagt 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2333 aatgaggagaaatggatacaccaacgttagaagccgataataaggatgtagtttgggagt 2274
Query: 661 tggaaaggttttgtctgtttctggatggagctttaaatggagtttgaggcttattcctag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2273 tggaaaggttttgtctgtttctggatggagctttaaatggagtttgaggcttattcctag 2214
Query: 721 atctggaatccatactacagtttggaggtggtaccgtcatcattgctgcagatgattgck 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2213 atctggaatccatactacagtttggaggtggtaccgtcatcattgctgcagatgattgcg 2154
Query: 781 agcgtgtaggcgcattcttctgggatttgaatacc 815
|||||||||||||||||||||||||||||||||||
Sbjct: 2153 agcgtgtaggcgcattcttctgggatttgaatacc 2119
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5522
Number of Sequences: 1807
Number of extensions: 5522
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 815
length of database: 10,358,551
effective HSP length: 16
effective length of query: 799
effective length of database: 10,329,639
effective search space: 8253381561
effective search space used: 8253381561
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)